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BioAutomators

113 members โ€ข Free

3 contributions to BioAutomators
Dec '25 โ€ขย 
General discussion
Variants Annotation Across 5 Databases
The template you've been asking for is finally here. Head to the Classroom right now and grab the Variants Annotation Workflow. What it does: Drop your genetic variants into a Google Sheet. The n8n workflow automatically queries: - ClinVar (pathogenicity) - PubMed (research papers) - dbSNP (variant IDs) - UniProt (protein function) - gnomAD (population frequency) Everything comes back annotated. Ready to analyze. This is for you if: - You've downloaded your 23andMe/MyHeritage raw data and have no idea what it means - You're a researcher tired of manual database queries - You want to see bioautomation in action Demo video included so you can see exactly how it works before you set it up. No bioinformatics background needed. Just import the template and follow the setup guide. ๐Ÿ‘‰ Go to Course Room โ†’ Variants Annotation Workflows โ†’ Download Template Questions? Drop them below.
1 like โ€ข Jan 29
๐Ÿ‘๐Ÿ‘
Jan 28 โ€ขย 
General discussion
๐Ÿš€ New Template Drop: Publication Radar!
Iโ€™ve uploaded a template that checks several publication sources, filters them by genes and diseases (that you can specify), summarizes them with AI, and sends a digest by email. This is useful if you want to keep track of new papers without checking platforms manually. You can adjust the schedule, search parameters, time window, and email delivery. The template and setup steps are posted here. If anyone adapts or improves it for other research use cases, feel free to share.
0 likes โ€ข Jan 29
Nice!
Nov '25 โ€ขย 
General discussion
๐ŸŽฌ New Lesson Added to TalkToClinVar Course! ๐ŸŽ‰
Hey Bioautomators! I just added a brand new tutorial to the TalkToClinVar Course Series! ๐Ÿš€ โ€œHow to Set Up DBeaver to Import ClinVar Data to Azure PostgreSQLโ€ This step-by-step lesson covers: โœ… Connecting DBeaver to Azure PostgreSQL โœ… Importing ClinVar genomic variant data โœ… Handling data mapping and transformations โœ… Troubleshooting common issues This is a crucial step in building your ClinVar automation workflow! ๐Ÿ’ก ๐Ÿ”— Check out the new lesson in the course now! Work through it at your own pace, and if you have any questions or run into any issues, drop them in the comments below. Iโ€™m here to help! ๐Ÿ‘‡ Letโ€™s keep building together! ๐Ÿ”ฌ๐Ÿ’ป
1 like โ€ข Nov '25
Ohh exciting
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Zeina Al-Ait
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3points to level up
@zeina-al-ait-9816
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Active 153d ago
Joined Oct 29, 2025