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Owned by Dr.

BioAutomators

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🚀 For bioinformaticians, scientists & creators automating the future. Build, innovate & turn workflows into impact. Automate. Analyze. Accelerate.

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19 contributions to BioAutomators
🚨 ALL 10 CHAPTERS + APPENDIX ARE LIVE IN THE CLASSROOM.
Chapters 6 through 10 just dropped — plus Appendix A for anyone who needed a Git/GitHub walkthrough before deploying. This is the final batch. PGx Guardian is complete. What you now have: 🧬 A genotype agent that reads real VCF files 🔗 A DGI agent matching genes to CPIC clinical guidelines ⚠️ A DDI agent checking every drug pair for dangerous interactions 📋 A report agent writing clinical + patient summaries via Gemini 2.0 Flash 🎙️ A voice interface for hands-free clinical workflows 🚀 A deployed app with a real public URL Every step has a test command so you know it works before moving on. Go finish it. The classroom is waiting. 🧬 Drop any questions in the comments - that's what we're here for.
Day 5 of 10 - PGx Guardian
This is about "The Genotype Agent" — Reading a Patient's DNA File and Translating It Into Meaningful Information.
0 likes • Apr 29
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DAY 4 of 10 - PGx Guardian
🧠 - The Coordinator Agent. This is the most important agent in the entire project. Every request — voice, text, DNA file, medication list — lands here first. The coordinator reads it, decides which specialist agents are needed, fires them all at the same time, and assembles the final answer. Today you build it from scratch. Including the part where Gemini itself reads each incoming request and decides what to do with it. Chapter 4 is live in the classroom. Drop your questions below. 👇
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DAY 3 OF 10 - PGx Guardian
Before your agents can think, they need somewhere to look things up. Today we build the four tables that power the entire system - gene variants, drug-gene rules, drug-drug interactions, and patient medications. If you have never worked with a database before, do not worry. Chapter 3 starts with a simple analogy that makes the whole thing click before we touch a single line of SQL.
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🛠️ DAY 2 OF 10 - PGx Guardian
Today is all about getting your environment ready before we write a single line of code. Cursor, Node.js, Python, Git, Supabase, Google Cloud, and your Gemini API key. Each one has a specific role in the app - the chapter explains exactly why you are installing it, not just what to install. Chapter 2 is live in the classroom.
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Dr. L
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9points to level up
@layal-yasin-8648
bioinformatician

Active 5h ago
Joined Oct 17, 2025